Fitness data for PP_4742 in Pseudomonas putida KT2440

Type I restriction-modification system, S subunit
SEED: Type I restriction-modification system, specificity subunit S (EC 3.1.21.3)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.2 compare
pH Growth at pH7 and (C) Trisodium citrate -0.6 -1.6 compare
pH Growth at pH7 and (C) D-Glucose -0.5 -1.4 compare
carbon source carbon source Bisabolol 45 mM -0.5 -2.2 compare
nitrogen source Ammonium chloride (N) -0.5 -3.1 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.5 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -1.5 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.4 -1.8 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.4 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.4 +2.5 compare
nitrogen source NAG (N); with MOPS +0.4 +1.4 compare
carbon source Crotonic (C) +0.4 +1.1 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.5 +2.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.5 +1.8 compare
nitrogen source Propiolactam (N) +0.5 +2.2 compare
toxin pUC18_phdP1_pSU18T_docP1 +0.5 +2.7 compare
nitrogen source nitrite (N) +0.5 +2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.5 +2.1 compare
pH Growth at pH7 and (C) D-Glucose +0.5 +2.4 compare
carbon source Delta-Nonalactone (C) +0.5 +2.5 compare