Fitness data for PP_4740 in Pseudomonas putida KT2440

Type I restriction enzyme EcoAI R protein
SEED: Type I restriction-modification system, restriction subunit R (EC 3.1.21.3)
KEGG: type I restriction enzyme, R subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.2)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
micoeukaryotes Tetrahymena sp., Mixed culture-1 -0.3 -2.0 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.2 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.2 -1.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.2 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.2 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.2 +1.3 compare
stress Growth with Chloride 200 mM +0.2 +1.5 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.2 +1.7 compare
carbon source 4-Hydroxyvalerate (C) (40mM) +0.2 +2.0 compare
pH pH 7 +0.2 +1.6 compare
carbon source Glucose (C) (20mM) +0.2 +2.1 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +0.2 +1.7 compare
stress Growth with Chloride 200 mM; with MOPS +0.3 +1.7 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM +0.3 +1.7 compare
nitrogen source no extra (N); with MOPS +0.3 +1.9 compare
nitrogen source 2,6-diaminopimelic (N) +0.3 +1.9 compare
pH Growth at pH6 and (C) D-Glucose +0.3 +1.8 compare
nitrogen source NAG (N); with MOPS +0.3 +1.9 compare
nitrogen source 2,6-diaminopimelic (N) +0.4 +2.6 compare