Fitness data for PP_4694 in Pseudomonas putida KT2440

Glutamyl-Q tRNA(Asp) synthetase
SEED: glutamyl-Q-tRNA synthetase
KEGG: glutamyl-Q tRNA(Asp) synthetase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source Propandiamine (N) -0.8 -4.3 compare
nitrogen source Beta-alanine (N) -0.7 -5.3 compare
nitrogen source Propandiamine (N) -0.6 -4.3 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -2.9 compare
nitrogen source Beta-alanine (N) -0.6 -4.2 compare
carbon source Lignin Monomers (C) +0.5 +3.5 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.5 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +2.3 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.5 +3.3 compare
carbon source L-Alanine (C) +0.5 +3.6 compare
carbon source Levulinic Acid (C) +0.5 +3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.5 +2.5 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +0.5 +2.3 compare
carbon source carbon source Bisabolene 48.9 mM +0.5 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +0.6 +3.1 compare
pH pH 6 +0.6 +3.2 compare
pH pH 9 +0.6 +2.9 compare
nitrogen source DL-2-Aminobutyric (N) +0.7 +4.7 compare
carbon source Lignin Monomers (C) +0.7 +4.9 compare