Fitness data for PP_4689 in Pseudomonas putida KT2440

Heme/hemin ABC transporter, periplasmic heme/hemin-binding protein
SEED: Periplasmic hemin-binding protein
KEGG: iron complex transport system substrate-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
nitrogen source nitrogen source nitrite 1mM -1.0 -1.9 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.9 -2.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.8 -2.4 compare
phage P. putida South MOI 10 -0.8 -1.4 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.8 -1.5 compare
carbon source Sebacic (C) -0.8 -2.3 compare
carbon source Valerolactone (C) -0.7 -1.8 compare
phage P. put PUT 10 MOI 1 -0.7 -3.4 compare
carbon source Ethyl decanoate (C) -0.7 -2.5 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.6 -2.8 compare
carbon source 3-Hydroxyhexanoic (C) -0.6 -2.5 compare
pH Growth at pH9 and (C) Trisodium citrate -0.6 -1.8 compare
pH Growth at pH9 and (C) Trisodium citrate -0.6 -1.8 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) +0.6 +1.7 compare
carbon source BC Lignin Sorghum 10 vol% (C) +0.6 +1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.6 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +1.4 compare
pH Growth at pH6 and (C) Trisodium citrate +0.7 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8 +1.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.8 +2.1 compare