Fitness data for PP_4687 in Pseudomonas putida KT2440

Hemin import ATP-binding protein HmuV
SEED: ABC-type hemin transport system, ATPase component
KEGG: iron complex transport system ATP-binding protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.3 -2.3 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. -1.0 -2.4 compare
carbon source ferulate (C); with MOPS -1.0 -1.8 compare
pH Growth at pH6 and (C) D-Glucose -1.0 -1.8 compare
nitrogen source 2,6-diaminopimelic (N) -1.0 -2.4 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.9 -2.6 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.9 -2.4 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.8 -1.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.8 -1.5 compare
temperature Growth at 10C; with MOPS -0.8 -2.3 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. -0.8 -1.6 compare
stress Growth with Chloride 500 mM; with MOPS -0.7 -2.2 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -2.3 compare
pH Growth at pH6 and (C) D-Glucose -0.7 -1.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.7 -1.2 compare
no stress control Growth with no stress -0.6 -1.4 compare
supernatant Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x and Ferric chloride 1 uM -0.6 -1.7 compare
phage P. putida Sci small MOI 0.1 +0.7 +1.6 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.7 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.0 +2.3 compare