Fitness data for PP_4682 in Pseudomonas putida KT2440

conserved protein of unknown function containing tetratricopeptide repeat domain
SEED: FOG: TPR repeat

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -3.0 -4.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.7 -4.0 compare
stress 1-Pentanol 0.3 vol% -1.5 -4.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.1 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.1 -2.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -1.0 -4.1 compare
stress 3-methyl-1-butanol 0.4 vol% -1.0 -2.8 compare
phage PUT8 MOI 0.1 -1.0 -4.0 compare
carbon source Valeric (C) +0.9 +2.1 compare
carbon source 4-Aminobutyric 10 mM (C) +0.9 +2.5 compare
carbon source 3-Hydroxyhexanoic (C) +0.9 +3.7 compare
carbon source Sebacic (C) +1.0 +3.3 compare
nitrogen source Caprolactam (N) +1.0 +2.8 compare
nitrogen source 2,6-diaminopimelic (N) +1.0 +2.7 compare
carbon source Ethyl decanoate and D-Glucose (C)s +1.1 +2.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +2.3 compare
carbon source Rhamnogalacturonan - from potato (C) +1.2 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +1.2 +3.3 compare
carbon source 2,3-Butanediol (C) +1.3 +4.2 compare