Fitness data for PP_4664 in Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Hydrogen peroxide-inducible genes activator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.3 -2.1 compare
pH pH 6 -0.8 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.7 -3.2 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.7 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -1.8 compare
pH Growth at pH9 and (C) D-Glucose -0.6 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.5 -1.6 compare
stress R2A with Fusaric 480 ug/mL -0.5 -1.8 compare
temperature Growth at 30C; with MOPS -0.5 -1.4 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.5 -1.6 compare
nitrogen source nitrogen source nitrite 1mM -0.5 -1.7 compare
carbon source D-Lysine 10 mM (C) +0.5 +2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +0.5 +2.2 compare
pH Growth at pH6 and (C) Trisodium citrate +0.5 +2.2 compare
nitrogen source NAG (N); with MOPS +0.5 +1.3 compare
nitrogen source Propiolactam (N) +0.5 +2.3 compare
carbon source DL-3-Hydroxyisobutyric (C) +0.5 +2.8 compare
phage PUT8 MOI 0.1 +0.6 +2.8 compare
nitrogen source D-2-Aminobutyric (N) +0.7 +2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.7 +2.8 compare