Fitness data for PP_4631 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: putative membrane protein
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
nitrogen source L-Isoleucine (N) -2.2 -8.3 compare
nitrogen source L-Isoleucine (N) -2.0 -4.7 compare
nitrogen source L-Leucine (N) -1.1 -4.3 compare
nitrogen source L-Leucine (N) -1.1 -4.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.1 -2.8 compare
carbon source L-Phenylalanine 5 mM (C) -1.0 -2.6 compare
stress MOPS minimal media_Glucose20mM with Lithium chloride 200 mM -1.0 -3.7 compare
temperature shift Temperature shift 30_to_25 -1.0 -1.9 compare
pH pH 9 -0.9 -1.4 compare
carbon source ferulate (C); with MOPS -0.9 -1.9 compare
nitrogen source Propandiamine (N) -0.9 -1.7 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.9 -2.0 compare
nitrogen source Propandiamine (N) -0.9 -1.8 compare
nitrogen source nitrogen source nitrite 0.5mM +0.9 +2.9 compare
phage P. putida PUT 7 MOI 1 +0.9 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +1.0 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml +1.1 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.3 +1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.9 +3.1 compare