Fitness data for PP_4627 in Pseudomonas putida KT2440

transcriptional regulator, LysR family
SEED: LysR family regulatory protein CidR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.5 -2.5 compare
pH pH 5 -1.4 -3.1 compare
pH D-Glucose (C) pH 6 -1.3 -2.3 compare
carbon source rac-3-Hydroxypentanoic Acid (C) -1.3 -2.1 compare
pH Growth at pH7 and (C) Trisodium citrate -1.3 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -1.2 -1.9 compare
stress R2A with Fusaric 120 ug/mL -1.2 -3.7 compare
carbon source 3-hydroxypentanoate -1.1 -2.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -2.4 compare
carbon source rac-3-Hydroxypentanoic Acid (C) -1.0 -1.5 compare
pH Growth at pH7 and (C) Trisodium citrate -0.9 -1.9 compare
carbon source DL-3-Hydroxybutyric (C) -0.9 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.9 -1.9 compare
carbon source 1,3-Butandiol (C) -0.8 -1.5 compare
pH Growth at pH6 and (C) D-Glucose -0.8 -1.3 compare
nitrogen source Hippuric (N) -0.8 -1.8 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.8 -1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.8 -2.0 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.9 +2.7 compare
nitrogen source D-2-Aminobutyric (N) +1.1 +2.1 compare