Fitness data for PP_4605 in Pseudomonas putida KT2440

Transcriptional regulator, AraC family
KEGG: AraC family transcriptional regulator

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source L-tyrosine 5 mM (C) -0.8 -4.1 compare
carbon source L-tyrosine 5 mM (C) -0.6 -3.5 compare
temperature Growth at 25C -0.6 -1.9 compare
carbon source L-tyrosine 5 mM (C) -0.6 -2.8 compare
carbon source Glycerol (C) -0.5 -2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.5 compare
phage P. putida Sci Big MOI 0.1 -0.5 -1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -1.7 compare
phage P. putida South MOI 0.1 -0.4 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.4 -2.2 compare
pH Growth at pH9 and (C) Trisodium citrate +0.4 +1.9 compare
carbon source L-Leucine (C) +0.4 +2.1 compare
carbon source Valerolactone (C) +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.4 +2.0 compare
nitrogen source Propiolactam (N) +0.4 +2.1 compare
nitrogen source nitrogen source nitrite 0.5mM +0.4 +2.0 compare
carbon source D-Glucose (C); with MOPS +0.5 +2.3 compare
phage P. putida Sci small MOI 0.1 +0.5 +2.4 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.6 +3.1 compare
nitrogen source 2,6-diaminopimelic (N) +0.6 +2.6 compare