Fitness data for PP_4594 in Pseudomonas putida KT2440

putative Cystathionine gamma-synthase
SEED: Cystathionine gamma-lyase (EC 4.4.1.1)
KEGG: cystathionine gamma-lyase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -2.1 compare
carbon source D-Glucose (C) -0.6 -1.4 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.6 -2.6 compare
pH Growth at pH9 and (C) Trisodium citrate -0.5 -1.9 compare
phage P. putida Sci Big MOI 0.1 -0.5 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -2.3 compare
carbon source ferulate (C); with MOPS -0.4 -1.3 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -0.4 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.4 -1.7 compare
nitrogen source Hydantoin (N) +0.4 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.4 +2.1 compare
pH Growth at pH7 and (C) Trisodium citrate +0.4 +1.4 compare
no stress control Growth with no stress +0.5 +2.0 compare
pH pH 8 +0.5 +1.9 compare
nitrogen source D-2-Aminobutyric (N) +0.5 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.3 compare
phage P. putida Sci small MOI 0.1 +0.6 +2.2 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels +0.6 +2.8 compare
stress R2A with Fusaric 480 ug/mL +0.6 +3.5 compare
carbon source ferulate (C); with MOPS +0.9 +4.1 compare