Fitness data for PP_4557 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
carbon source Hexanoic (C) -0.6 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.5 -2.0 compare
pH Growth at pH8 and (C) D-Glucose -0.5 -1.6 compare
micoeukaryotes C.elegans, mixed culture-2 -0.5 -1.9 compare
pH D-Glucose (C) pH 6 -0.5 -1.6 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose -0.4 -2.2 compare
carbon source Delta-Nonalactone (C) -0.4 -2.3 compare
toxin pUC18_phdP1_pSU18T_docP1 -0.4 -2.4 compare
stress R2A with Fusaric 240 ug/mL -0.4 -2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -1.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.0 compare
carbon source Valeric (C) -0.4 -2.0 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.4 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.2 compare
phage P. putida South MOI 0.1 +0.4 +2.4 compare
pH pH 5 +0.5 +1.9 compare
carbon source carbon source D-Glucose 55.5 mM +0.5 +1.7 compare
nitrogen source D-2-Aminobutyric (N) +0.6 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +2.3 compare