Fitness data for PP_4556 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Ketosteroid isomerase homolog

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
stress R2A with Polymyxin B sulfate 0.002 mg/ml -2.0 -2.5 compare
pH Growth at pH6 and (C) Trisodium citrate -1.8 -1.7 compare
carbon source D-Glucose (C) -1.8 -2.2 compare
carbon source Nonanoic (C) -1.7 -3.3 compare
nitrogen source Urea (N) -1.6 -3.0 compare
carbon source D-Glucose (C) -1.4 -2.1 compare
temperature Growth at 25C -1.3 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.3 -2.3 compare
pH Growth at pH8 and (C) D-Glucose -1.3 -1.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -2.0 compare
phage P. putida Sci small MOI 0.1 -1.3 -1.0 compare
pH Growth at pH7 and (C) Trisodium citrate -1.2 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.2 -2.5 compare
nitrogen source NAG (N); with MOPS -1.2 -1.8 compare
nitrogen source nitrite (N) -1.1 -1.2 compare
no stress control Growth with no stress -1.1 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.1 -3.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 +1.1 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.2 +1.2 compare
nitrogen source 2,6-diaminopimelic (N) +1.4 +2.8 compare