Fitness data for PP_4537 in Pseudomonas putida KT2440

conserved membrane protein of unknown function
SEED: MadN protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -0.6 -1.9 compare
carbon source Levulinic Acid (C) -0.6 -4.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.3 compare
carbon source Levulinic Acid (C) -0.5 -3.7 compare
nitrogen source no extra (N); with MOPS -0.5 -2.2 compare
nitrogen source no extra (N); with MOPS -0.4 -1.9 compare
carbon source 1,3-Butandiol (C) -0.4 -1.9 compare
phage P. put South MOI 10 -0.4 -1.7 compare
carbon source D-Glucose (C) -0.4 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
carbon source Tween 20 (C) -0.4 -1.7 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.2 compare
temperature shift Temperature shift 10_to_21; with MOPS -0.4 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.4 -1.5 compare
pH Valerolactone (C) pH 6.5 -0.3 -1.9 compare
phage P. putida South MOI 10 -0.3 -1.5 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.3 +2.1 compare