Fitness data for PP_4525 in Pseudomonas putida KT2440

Transcriptional regulator, LysR family
SEED: Transcriptional regulators, LysR family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source Propiolactam (N) -1.0 -2.9 compare
nitrogen source Propiolactam (N) -0.9 -2.7 compare
carbon source Tween 20 (C) -0.6 -1.9 compare
temperature shift Temperature shift 10_to_25; with MOPS -0.5 -2.1 compare
carbon source 4-Aminobutyric 10 mM (C) -0.4 -1.7 compare
carbon source ferulate (C); with MOPS -0.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.8 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.4 -1.6 compare
temperature Growth at 25C -0.4 -1.6 compare
phage P. putida South MOI 10 -0.4 -1.5 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +2.1 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.5 +1.7 compare
carbon source D-Lysine 10 mM (C) +0.5 +2.4 compare
pH Growth at pH7 and (C) Trisodium citrate +0.5 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.5 +1.3 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.5 +2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.6 +2.3 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM +0.6 +3.4 compare