Fitness data for PP_4518 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG039061: hypothetical protein related to heme utilization
KEGG: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
pH Growth at pH9 and (C) Trisodium citrate -1.9 -3.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.1 -3.4 compare
pH Growth at pH9 and (C) Trisodium citrate -0.9 -2.4 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.9 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -1.7 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.8 -2.9 compare
nitrogen source nitrate (N) -0.8 -2.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8 -2.8 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.8 -2.0 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -0.8 -2.8 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -0.8 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.8 -2.0 compare
phage PUT8 MOI 0.1 -0.7 -2.3 compare
nitrogen source nitrogen source nitrite 0.5mM -0.7 -1.8 compare
no stress control Growth with no stress -0.7 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.7 -2.5 compare
nitrogen source Urea (N); with MOPS -0.7 -1.4 compare
pH pH 9 -0.7 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.7 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.1 compare