Fitness data for PP_4516 in Pseudomonas putida KT2440

ATP-dependent DNA 3
SEED: ATP-dependent DNA helicase RecQ
KEGG: ATP-dependent DNA helicase RecQ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.8 -3.0 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.6 -3.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.6 -2.9 compare
nitrogen source NAG (N); with MOPS -0.6 -2.0 compare
carbon source Delta-Nonalactone (C) -0.5 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.9 compare
temperature shift Temperature shift 30_to_4; with MOPS -0.5 -2.8 compare
nitrogen source 2,6-diaminopimelic (N) -0.4 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.4 -2.2 compare
temperature shift Temperature shift 30_to_21; with MOPS -0.4 -1.6 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.5 compare
carbon source Lignin Monomers (C) -0.4 -2.5 compare
stress Growth with Chloride 500 mM; with MOPS -0.4 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.1 compare
carbon source 3-methyl-1-butanol (C) -0.4 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.3 compare
stress R2A with Fusaric 480 ug/mL -0.4 -2.0 compare
phage P. putida Missley MOI 0.1 -0.4 -1.8 compare
carbon source ferulate (C); with MOPS +0.4 +1.4 compare
temperature Growth at 25C; with MOPS +0.4 +2.2 compare