Fitness data for PP_4499 in Pseudomonas putida KT2440

putative maturation enzyme
SEED: Hypothetical YciO protein, TsaC/YrdC paralog
KEGG: putative translation factor

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
pH Growth at pH7 and (C) Trisodium citrate -2.3 -2.1 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -2.9 compare
temperature Growth at 30C; with MOPS -1.5 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.4 -2.1 compare
temperature shift Temperature shift 30_to_4; with MOPS -1.3 -3.5 compare
phage PUT8 MOI 0.1 -1.3 -2.8 compare
phage P. putida South MOI 0.1 -1.1 -2.3 compare
temperature shift Temperature shift 30_to_4 -1.1 -4.1 compare
temperature shift Temperature shift 30_to_4; with MOPS -1.0 -4.3 compare
stress R2A with Fusaric 480 ug/mL -1.0 -2.9 compare
carbon source Delta-Decalactone (C) -1.0 -2.1 compare
carbon source Crotonic (C) -1.0 -1.5 compare
pH Growth at pH7 and (C) D-Glucose -1.0 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -1.1 compare
temperature shift Temperature shift 30_to_4; with MOPS -1.0 -3.4 compare
pH Growth at pH7 and (C) Trisodium citrate -1.0 -1.8 compare
phage P. putida South MOI 0.1 -0.9 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.1 +1.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +1.7 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +2.0 compare