Fitness data for PP_4462 in Pseudomonas putida KT2440

putative 4-hydroxy-4-methyl-2-oxoglutarate aldolase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
carbon source carbon source 4-vinylphenol 0.01 mM -1.1 -2.9 compare
nitrogen source Ammonium chloride (N) -0.9 -2.1 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.8 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.7 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.7 -2.4 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.7 -2.5 compare
carbon source carbon source 2-Deoxy-D-glucose 10 mM -0.6 -1.9 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.6 -2.0 compare
carbon source 1,3-Butandiol (C) -0.6 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +2.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.8 compare
temperature shift Temperature shift 10_to_30 +0.7 +3.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.7 +2.5 compare
phage P. putida PUT 7 MOI 1 +0.8 +3.3 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.8 +3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.9 +3.1 compare
phage P. putida Missley MOI 0.1 +0.9 +3.2 compare
phage P. putida Sci small MOI 0.1 +0.9 +2.8 compare