Fitness data for PP_4434 in Pseudomonas putida KT2440

D-amino acid dehydrogenase 1 small subunit
SEED: D-amino acid dehydrogenase small subunit (EC 1.4.99.1)
KEGG: D-amino-acid dehydrogenase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
pH Growth at pH6 and (C) Trisodium citrate -0.7 -3.3 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.6 -3.7 compare
pH pH 4 -0.4 -2.2 compare
nitrogen source NAG (N); with MOPS -0.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.4 compare
nitrogen source nitrogen source nitrite 0.5mM -0.4 -1.9 compare
pH Growth at pH9 and (C) D-Glucose -0.4 -2.4 compare
pH Growth at pH9 and (C) Trisodium citrate -0.4 -1.8 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.4 -2.1 compare
temperature shift Temperature shift 10_to_34; with MOPS -0.4 -2.0 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.4 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +2.1 compare
phage P. putida Sci small MOI 0.1 +0.4 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 +2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.4 +2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4 +2.1 compare
nitrogen source nitrate (N) +0.5 +2.5 compare
phage P. putida PUT 7 MOI 1 +0.7 +4.3 compare
phage P. putida Missley MOI 0.1 +0.7 +4.1 compare