Fitness data for PP_4424 in Pseudomonas putida KT2440

Uncharacterized HTH-type transcriptional regulator y4tD
SEED: Transcriptional regulator, AsnC family
KEGG: Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.4)


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group condition fitness t score  
pH Growth at pH9 and (C) Trisodium citrate -6.8 -3.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -3.8 -2.2 compare
temperature Growth at 25C -2.9 -1.9 compare
temperature shift Temperature shift 10_to_25; with MOPS -2.7 -1.8 compare
carbon source ferulate (C); with MOPS -2.4 -2.0 compare
carbon source 1,3-Butandiol (C) -2.2 -1.4 compare
carbon source D-Glucose (C) with 20AA_mix_minus_Cys -2.2 -2.3 compare
carbon source ferulate (C); with MOPS -2.1 -1.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -2.0 -1.8 compare
carbon source Tween 20 (C) -1.9 -1.9 compare
nitrogen source D-2-Aminobutyric (N) -1.9 -1.8 compare
phage P. putida Sci small MOI 0.1 -1.7 -1.3 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.7 -2.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -1.6 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.6 -2.0 compare
nitrogen source nitrogen source nitrate 20mM -1.5 -2.1 compare
temperature shift Temperature shift 10_to_30; with MOPS -1.5 -1.3 compare
temperature Growth at 25C; with MOPS -1.5 -1.7 compare
nitrogen source no extra (N) -1.4 -3.2 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.9 +1.4 compare