Fitness data for PP_4413 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


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group condition fitness t score  
temperature Growth at 34C -0.8 -3.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.8 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -2.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.7 -2.1 compare
pH Growth at pH7 and (C) Trisodium citrate -0.6 -1.3 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.6 -2.4 compare
carbon source Tween 20 (C) -0.6 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.6 -1.4 compare
pH Growth at pH6 and (C) D-Glucose +0.5 +1.3 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM +0.5 +2.2 compare
carbon source L-Phenylalanine 5 mM (C) +0.5 +2.3 compare
phage PUT 8 MOI 1 +0.6 +1.3 compare
pH Growth at pH6 and (C) D-Glucose +0.6 +1.7 compare
stress MOPS minimal media_Glucose20mM with Chloride 200 mM +0.6 +2.8 compare
carbon source D-Glucose (C); with MOPS +0.6 +2.1 compare
stress Growth with Chloride 500 mM; with MOPS +0.6 +2.2 compare
nitrogen source Propandiamine (N) +0.7 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.0 +2.2 compare
nitrogen source 2,6-diaminopimelic (N) +1.0 +3.0 compare