Fitness data for PP_4410 in Pseudomonas putida KT2440

conserved protein of unknown function

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.8 -3.3 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.6 -3.2 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.5 -2.2 compare
temperature shift Temperature shift 30_to_25; with MOPS -0.4 -1.9 compare
pH D-Glucose (C) pH 6.5 +0.4 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +1.8 compare
pH Growth at pH7 and (C) Trisodium citrate +0.4 +1.8 compare
carbon source Crotonic (C) +0.4 +1.8 compare
carbon source Sorghum Hydrolysate (C) +0.4 +3.1 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.4 +2.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +2.1 compare
phage P. putida Sci small MOI 0.1 +0.5 +2.4 compare
phage PUT8 MOI 10 +0.5 +3.1 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.6 +2.1 compare
phage PUT8 MOI 10 +0.6 +3.5 compare
phage PUT8 MOI 0.1 +0.6 +3.3 compare
phage PUT 8 MOI 1 +0.6 +2.9 compare
phage P. putida PUT 7 MOI 1 +0.7 +3.6 compare
phage P. putida Sci small MOI 0.1 +0.7 +3.7 compare
phage P. putida Missley MOI 0.1 +0.8 +4.8 compare