Fitness data for PP_4389 in Pseudomonas putida KT2440

Flagellar basal-body rod modification protein FlgD
SEED: Flagellar basal-body rod modification protein FlgD
KEGG: flagellar basal-body rod modification protein FlgD

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.4 -4.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.4 -4.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.1 -6.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.9 -7.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -1.8 -4.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.7 -6.2 compare
carbon source L-Phenylalanine 5 mM (C) -1.7 -5.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.6 -5.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.6 -5.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.5 -5.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -1.5 -3.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.5 +9.1 compare
nitrogen source DL-2-Aminobutyric (N) +1.6 +11.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.6 +10.3 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +1.7 +9.5 compare
stress 1-Pentanol 0.3 vol% +1.8 +12.8 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose +2.1 +11.5 compare
nitrogen source Propiolactam (N) +2.1 +9.5 compare
stress 3-methyl-1-butanol 0.4 vol% +2.3 +12.2 compare
stress Geraniol 1 vol% +3.6 +26.1 compare