Fitness data for PP_4356 in Pseudomonas putida KT2440

Flagellar protein FliO
SEED: Flagellar biosynthesis protein FliQ
KEGG: flagellar protein FliO/FliZ

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 2.3)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -4.4 -2.3 compare
micoeukaryotes C.elegans, mixed culture-1 -3.6 -2.8 compare
micoeukaryotes Dictyostellum sp.mixed culture-1 -3.0 -2.9 compare
carbon source L-Phenylalanine 5 mM (C) -3.0 -3.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.9 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -2.9 -3.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.7 -3.8 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -2.7 -2.4 compare
carbon source D-Glucaric (C) -2.5 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -2.4 -5.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -2.4 -2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.3 -2.6 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +2.3 +11.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +2.4 +8.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +2.4 +10.1 compare
stress 3-methyl-1-butanol 0.4 vol% +2.5 +10.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +2.5 +3.6 compare
nitrogen source Propiolactam (N) +2.6 +7.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI +2.7 +10.1 compare
stress Geraniol 1 vol% +4.0 +25.6 compare