Fitness data for PP_4350 in Pseudomonas putida KT2440

Aminotransferase, class V, NifS/IscS family
SEED: Cysteine desulfurase (EC 2.8.1.7)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
carbon source Tween 20 (C) -1.2 -1.5 compare
temperature Growth at 25C -1.0 -1.6 compare
phage moi 100 Time6-phageFRS -0.9 -3.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.9 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.9 -2.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9 -1.6 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -0.9 -2.2 compare
carbon source ferulate (C); with MOPS -0.7 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.7 -1.7 compare
nitrogen source nitrate (N) -0.6 -1.2 compare
temperature shift Temperature shift 30_to_10; with MOPS -0.6 -2.9 compare
carbon source acetate (C) -0.6 -1.1 compare
nitrogen source D-2-Aminobutyric (N) -0.6 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.6 -1.3 compare
pH Growth at pH8 and (C) Trisodium citrate -0.6 -1.6 compare
phage P. putida Sci Big MOI 0.1 +0.6 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +0.9 compare
phage P. putida Missley MOI 0.1 +0.6 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days +0.6 +2.1 compare
nitrogen source 2,6-diaminopimelic (N) +0.6 +2.4 compare