Fitness data for PP_4317 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Oxidoreductase, short chain dehydrogenase/reductase family (EC 1.1.1.100)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.1)


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group condition fitness t score  
temperature shift Temperature shift 30_to_21; with MOPS -2.0 -1.9 compare
carbon source acetate (C) -1.8 -1.2 compare
pH Growth at pH7 and (C) Trisodium citrate -1.8 -1.4 compare
pH Growth at pH9 and (C) Trisodium citrate -1.7 -3.1 compare
phage P. putida Missley MOI 0.1 -1.5 -2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.4 -1.3 compare
phage P. putida PUT 7 MOI 1 -1.4 -1.3 compare
phage P. putida South MOI 10 -1.4 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.3 -1.3 compare
stress R2A with Fusaric 480 ug/mL -1.2 -2.2 compare
carbon source L-Phenylalanine 5 mM (C) -1.2 -2.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-2 -1.2 -1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.2 -1.4 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -1.1 -2.0 compare
carbon source Valerolactone (C) -1.1 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.2 +1.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant +1.3 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +2.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.7 +2.8 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.7 +1.1 compare