Fitness data for PP_4310 in Pseudomonas putida KT2440

putative Hydantoin racemase
SEED: Hydantoin racemase (EC 5.1.99.-)
KEGG:

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.5)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -0.6 -3.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.6 -2.1 compare
nitrogen source Urea (N) -0.6 -1.9 compare
temperature Growth at 30C; with MOPS -0.6 -1.6 compare
nitrogen source NAG (N); with MOPS -0.6 -1.1 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.5 -2.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.4 compare
temperature shift Temperature shift 10_to_30; with MOPS -0.5 -2.1 compare
temperature Growth at 25C -0.5 -1.5 compare
carbon source 5-Aminovaleric 10 mM (C) -0.5 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -2.0 compare
nitrogen source nitrite (N) -0.5 -2.4 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.5 -1.5 compare
pH Growth at pH8 and (C) Trisodium citrate +0.5 +2.0 compare
reactor 48hr timepoint of 1L M9/1% dextrose DISCONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat set to 10% DO. +0.5 +2.1 compare
carbon source carbon source D-Glucose 55.5 mM +0.5 +2.0 compare
pH pH 9 +0.5 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.5 +2.4 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.0 +2.1 compare