Fitness data for PP_4309 in Pseudomonas putida KT2440

Transporter, NCS1 nucleoside transporter family
SEED: Hydantoin permease
KEGG: nucleobase:cation symporter-1, NCS1 family

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.2 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.6 -2.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -3.0 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.5 -2.5 compare
nitrogen source nitrogen source nitrite 1mM -0.5 -2.3 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.9 compare
nitrogen source nitrogen source nitrate 20mM -0.5 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.5 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.5 -1.7 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -0.5 -1.7 compare
phage P. putida Sci small MOI 0.1 -0.4 -1.6 compare
pH pH 8 -0.4 -2.2 compare
pH Growth at pH6 and (C) D-Glucose -0.4 -1.5 compare
pH pH 9 -0.4 -1.5 compare
nitrogen source nitrogen source nitrite 1mM -0.4 -1.8 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.7 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.4 -2.3 compare
carbon source Acetate Carbon Source (20mM) +0.4 +2.3 compare
phage PUT8 MOI 0.1 +0.4 +2.1 compare
carbon source Valerolactone (C) +0.4 +2.1 compare