Fitness data for PP_4306 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Methyltransferase (EC 2.1.1.-)
KEGG: ribosomal RNA large subunit methyltransferase I

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.6)


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group condition fitness t score  
phage P. putida Sci small MOI 0.1 -1.4 -2.8 compare
nitrogen source Propandiamine (N) -1.0 -3.0 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.9 -3.6 compare
carbon source 3-methyl-1-butanol 0.25 vol% (C) -0.8 -2.1 compare
carbon source Myristic (C) -0.7 -1.6 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.6 -1.8 compare
no stress control Growth with no stress -0.6 -1.7 compare
nitrogen source Urea (N) -0.6 -1.4 compare
nitrogen source Propandiamine (N) -0.6 -2.4 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM +0.6 +2.0 compare
phage P. putida PUT10 MOI 10 +0.6 +2.9 compare
phage P. putida South MOI 0.1 +0.6 +3.6 compare
pH pH 8 +0.6 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.6 +1.5 compare
pH Growth at pH7 and (C) Trisodium citrate +0.6 +2.1 compare
phage P. put South MOI 1 +0.6 +3.2 compare
carbon source Crotonic (C) +0.6 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs +0.7 +1.7 compare
phage P. putida South MOI 1 +0.7 +5.0 compare
phage P. put PUT 10 MOI 1 +0.8 +5.3 compare