Fitness data for PP_4298 in Pseudomonas putida KT2440

hydroxypyruvate isomerase
SEED: Hydroxypyruvate isomerase (EC 5.3.1.22)
KEGG: hydroxypyruvate isomerase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.0 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.6 -2.6 compare
carbon source Delta-Decalactone (C) -0.6 -3.3 compare
no stress control Growth with no stress -0.6 -2.3 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.5 -2.7 compare
carbon source butyrate (C) -0.5 -3.1 compare
r2a control R2A control -0.5 -2.8 compare
carbon source Delta-Dodecalactone (C) -0.5 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.4 -2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -0.4 -2.3 compare
temperature shift Temperature shift 10_to_34; with MOPS -0.4 -2.3 compare
temperature Growth at 30C; with MOPS -0.4 -2.0 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.2X -0.4 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.4 -2.5 compare
supernatant Supernatant; Paenibacillus sp. UNCCL52 spent media 0.5x +0.4 +2.6 compare
pH Valerolactone (C) pH 6.5 +0.4 +1.9 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM +0.5 +1.9 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +0.6 +2.5 compare