Fitness data for PP_4267 in Pseudomonas putida KT2440

Recombination protein RecR
SEED: Recombination protein RecR
KEGG: recombination protein RecR

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
nitrogen source NAG (N); with MOPS -1.6 -2.0 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -1.3 -2.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.3 -1.8 compare
pH pH 5 -1.3 -3.3 compare
carbon source ferulate (C); with MOPS -1.2 -2.2 compare
carbon source Crotonic (C) -1.2 -3.0 compare
carbon source 3-methyl-1-butanol (C) -1.1 -3.2 compare
stress Growth with Chloride 200 mM; with MOPS -1.1 -3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.0 -2.1 compare
stress Growth with Chloride 200 mM -1.0 -1.8 compare
carbon source 3-methyl-1-butanol (C) -1.0 -4.9 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.0 -2.6 compare
carbon source ferulate (C); with MOPS -0.9 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.9 -1.4 compare
temperature Growth at 25C; with MOPS -0.9 -2.1 compare
micoeukaryotes Acanthamoeba sp., muxed culture-1 -0.9 -2.9 compare
nitrogen source L-Cysteine (N) -0.9 -2.7 compare
pH Growth at pH9 and (C) Trisodium citrate -0.8 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.0 +1.9 compare