Fitness data for PP_4264 in Pseudomonas putida KT2440

oxygen-independent coproporphyrinogen III dehydrogenase
SEED: Coproporphyrinogen III oxidase, oxygen-independent (EC 1.3.99.22)
KEGG: oxygen-independent coproporphyrinogen III oxidase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
phage PUT 8 MOI 1 -4.6 -9.0 compare
phage PUT8 MOI 10 -2.5 -6.4 compare
phage PUT8 MOI 0.1 -2.5 -5.5 compare
stress R2A with Fusaric 480 ug/mL -2.2 -5.5 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.2 -7.1 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.1 -8.6 compare
stress R2A with Fusaric 480 ug/mL -2.1 -6.8 compare
phage PUT8 MOI 0.1 -2.0 -5.2 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X -2.0 -7.5 compare
stress R2A with Fusaric 480 ug/mL -2.0 -5.9 compare
stress R2A with Fusaric 480 ug/mL -2.0 -6.8 compare
phage P. put PUT 10 MOI 0.1 -1.8 -7.0 compare
stress R2A with Fusaric 480 ug/mL -1.7 -5.0 compare
stress R2A with Fusaric 480 ug/mL -1.7 -5.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.6 -3.9 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.4 -4.7 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -1.4 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -1.3 -4.1 compare
phage PUT8 MOI 10 -1.3 -4.4 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +2.2 +3.3 compare