Fitness data for PP_4261 in Pseudomonas putida KT2440

cation-transporting P-type ATPase
SEED: Type cbb3 cytochrome oxidase biogenesis protein CcoI; Copper-translocating P-type ATPase (EC 3.6.3.4)
KEGG: Cu2+-exporting ATPase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.6)


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group condition fitness t score  
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -3.8 -6.5 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -3.8 -5.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.4 -5.7 compare
stress Geraniol 1 vol% -2.4 -7.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -2.3 -4.4 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -2.1 -4.4 compare
micoeukaryotes C.elegans, mixed culture-1 -2.0 -5.3 compare
temperature LB_noSalt 30C -2.0 -4.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -2.0 -4.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -2.0 -4.2 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -1.9 -4.6 compare
nitrogen source NAG (N); with MOPS -1.9 -3.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -1.8 -3.8 compare
lb LB -1.8 -5.3 compare
lb LB -1.7 -6.2 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.7 -3.0 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -1.7 -4.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.7 -4.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -1.6 -2.7 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +2.2 +1.4 compare