Fitness data for PP_4228 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00958716: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.0 -2.9 compare
nitrogen source nitrogen source nitrate 20mM -1.0 -2.6 compare
carbon source Sorghum Hydrolysate (C) -1.0 -4.0 compare
phage P. putida PUT 7 MOI 1 -0.9 -2.1 compare
temperature Growth at 25C -0.9 -1.8 compare
nitrogen source nitrite (N) -0.8 -1.9 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.8 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.8 -3.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -0.8 -1.8 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.8 -2.1 compare
nitrogen source nitrogen source nitrite 0.5mM -0.8 -2.0 compare
carbon source D-Lysine 10 mM (C) -0.7 -2.0 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.7 +2.3 compare
stress MOPS minimal media_Glucose20mM with Chloramphenicol 25 .g/mL +0.7 +2.4 compare
carbon source 3-methyl-1-butanol 0.1 vol% (C) +0.8 +1.7 compare
pH pH 7 +0.8 +1.5 compare
dilutelb LB 0.1x with 55.5 mM D-Glucose +0.8 +3.2 compare
pH D-Glucose (C) pH 6 +0.8 +3.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.9 +1.3 compare
carbon source carbon source 3-O-methyl-glucose 50 mM +1.2 +2.1 compare