Fitness data for PP_4227 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Sensor histidine kinase

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.6)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -3.7 -1.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -3.0 -1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -2.5 -2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -2.5 -1.4 compare
pH pH 6 -2.4 -1.4 compare
nitrogen source no extra (N) -2.1 -2.4 compare
pH Valerolactone (C) pH 6.5 -2.0 -1.6 compare
carbon source L-Lysine (C) -1.8 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.8 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.8 -1.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.8 -1.1 compare
stress Growth with Chloride 200 mM; with MOPS -1.8 -1.1 compare
temperature shift Temperature shift 30_to_4 -1.8 -2.4 compare
carbon source Glucose (C) (40mM) -1.7 -1.6 compare
pH Growth at pH8 and (C) Trisodium citrate -1.7 -1.3 compare
nitrogen source Beta-alanine (N) -1.6 -3.0 compare
carbon source Acetate Carbon Source (5mM) -1.6 -2.6 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -1.6 -1.4 compare
carbon source Hexanoic (C) +1.6 +2.5 compare
carbon source Tween 20 (C) +1.7 +2.9 compare