Fitness data for PP_4225 in Pseudomonas putida KT2440

two component system DNA-binding transcriptional activator QseB
SEED: Two-component system response regulator QseB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source Urea (N) -1.8 -4.5 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.2 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -1.2 -3.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -1.0 -2.0 compare
stress Growth with Chloride 500 mM -0.9 -3.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -0.9 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -0.9 -1.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.9 -2.8 compare
pH Growth at pH9 and (C) Trisodium citrate -0.8 -2.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.8 -3.3 compare
carbon source D-Lysine 10 mM (C) -0.8 -2.8 compare
stress Growth with Chloride 200 mM; with MOPS -0.8 -1.6 compare
nitrogen source nitrogen source Ammonium chloride 20mM -0.8 -2.7 compare
phage P. putida PUT 7 MOI 1 -0.8 -2.0 compare
carbon source ferulate (C); with MOPS -0.7 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.7 +1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs +0.8 +1.9 compare
pH pH 6 +0.8 +1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.8 +2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs +0.9 +3.0 compare