Fitness data for PP_4205 in Pseudomonas putida KT2440

mRNA interferase MqsR of the MqsA-MqsR antitoxin/toxin complex and DNA-binding transcriptional repressor
SEED: Toxin mRNA interferase YgiU
KEGG: motility quorum-sensing regulator / GCU-specific mRNA interferase toxin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.7)


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group condition fitness t score  
nitrogen source nitrogen source nitrite 0.5mM -1.2 -3.3 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.9 -1.9 compare
phage PUT 8 MOI 1 -0.9 -1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs -0.8 -2.5 compare
nitrogen source nitrate (N) -0.8 -1.8 compare
nitrogen source Urea (N) -0.8 -1.9 compare
carbon source D-Glucose (C) -0.7 -2.0 compare
carbon source ferulate (C); with MOPS -0.7 -1.9 compare
carbon source Myristic (C) -0.7 -2.0 compare
carbon source Valeric (C) -0.7 -3.5 compare
carbon source 4-Methyl-2-oxopentanoic (C) -0.7 -1.8 compare
phage moi 100 Time6-phageFRS -0.7 -2.5 compare
phage P. putida PUT 7 MOI 1 -0.7 -1.3 compare
nitrogen source DL-3-Aminoisobutyric (N) -0.7 -2.4 compare
nitrogen source nitrogen source nitrite 1mM -0.7 -2.4 compare
nitrogen source 2,6-diaminopimelic (N) -0.7 -1.3 compare
nitrogen source D-2-Aminobutyric (N) +0.7 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.7 +1.0 compare
temperature Growth at 25C; with MOPS +0.7 +2.0 compare