Fitness data for PP_4180 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00953296: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.8)


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group condition fitness t score  
pH Growth at pH6 and (C) D-Glucose -2.6 -1.8 compare
nitrogen source NAG (N); with MOPS -1.8 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -1.7 -2.4 compare
nitrogen source Ammonium chloride (N) -1.3 -1.3 compare
phage P. putida Missley MOI 0.1 -1.1 -1.5 compare
nitrogen source D-2-Aminobutyric (N) -1.0 -1.2 compare
carbon source D-Glucose (C) 10 mM -1.0 -2.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.9 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.9 -1.2 compare
nitrogen source Hydantoin (N) -0.9 -2.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=144_hrs -0.8 -2.3 compare
pH Growth at pH6 and (C) Trisodium citrate +0.8 +1.8 compare
phage P. putida Sci small MOI 0.1 +0.8 +1.3 compare
temperature shift Temperature shift 10_to_25; with MOPS +0.8 +2.4 compare
temperature Growth at 25C +0.8 +2.1 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.9 +1.4 compare
reactor 72hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO with 20% v/v oleyl alcohol overlay +1.0 +3.0 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days +1.0 +2.0 compare
phage P. putida PUT 7 MOI 1 +1.2 +2.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +2.4 +3.3 compare