Fitness data for PP_4177 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Pirin

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source Urea (N) -0.6 -2.5 compare
carbon source D-Glucose (C) -0.6 -2.2 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -0.6 -2.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI -0.6 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -0.5 -1.7 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Phenylalanine 5 mM -0.5 -2.7 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.7 compare
pH Growth at pH7 and (C) Trisodium citrate -0.5 -2.8 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X -0.5 -2.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and 3-Chloro-L-tyrosine 10 mM -0.5 -2.2 compare
phage PUT8 MOI 0.1 -0.4 -2.5 compare
pH pH 6 +0.4 +1.7 compare
temperature shift Temperature shift 30_to_21; with MOPS +0.4 +1.9 compare
supernatant Supernatant; Trichoderma atroviride IMI dcr22mutant grown in Vogels_fungal_media, filtered; 0.8X +0.5 +1.7 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.5 +1.9 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 +0.5 +1.6 compare
stress Growth with Chloride 200 mM; with MOPS +0.5 +2.3 compare
pH Growth at pH8 and (C) D-Glucose +0.5 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.5 +1.9 compare
phage PUT 8 MOI 1 +0.6 +2.7 compare