Fitness data for PP_4154 in Pseudomonas putida KT2440

putative class 3 aminotransferase
SEED: aminotransferase, class III

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.4 -1.7 compare
phage P. putida Sci Big MOI 0.1 -0.4 -1.6 compare
nitrogen source Urea (N); with MOPS -0.4 -2.1 compare
pH pH 8 -0.4 -1.7 compare
carbon source Crotonic (C) -0.4 -2.2 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -1.6 compare
carbon source Tween 20 (C) -0.4 -1.9 compare
carbon source acetate (C) -0.4 -1.5 compare
pH Growth at pH6 and (C) Trisodium citrate -0.3 -1.6 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI dcr2mutant -0.3 -2.1 compare
carbon source Valeric (C) -0.3 -1.4 compare
nitrogen source Hippuric (N) -0.3 -2.2 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -2.4 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.3 -1.6 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.3 -1.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.3 -1.7 compare
nitrogen source D-2-Aminobutyric (N) +0.3 +1.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days +0.3 +2.1 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.4 +2.3 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +2.4 compare