Fitness data for PP_4109 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: FIG00957947: hypothetical protein

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.5)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -5.0 -2.4 compare
carbon source carbon source 4-vinylphenol 0.01 mM -4.3 -3.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -3.1 -2.0 compare
nitrogen source 2,6-diaminopimelic (N) -2.2 -2.1 compare
phage P. putida Sci small MOI 0.1 -2.0 -1.7 compare
nitrogen source NAG (N); with MOPS -2.0 -1.0 compare
carbon source 3-Hydroxydecanoic (C) -1.9 -2.8 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=no_outgrowth_LB; Time=7_days -1.9 -2.2 compare
carbon source carbon source 3-O-methyl-glucose 10 mM -1.7 -2.5 compare
pH pH 9 -1.7 -2.3 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.6 -1.2 compare
time series Timeseries; MAX condition; Bioreplicate 1; Time 4hrs; Measurement -1.6 -4.1 compare
carbon source carbon source Bisabolene 48.9 mM -1.6 -2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant -1.6 -2.0 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -1.6 -2.4 compare
temperature Growth at 30C; with MOPS -1.5 -0.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -1.5 -1.4 compare
temperature Growth at 30C -1.5 -1.4 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 30% DO. -1.5 -2.2 compare
pH Growth at pH6 and (C) Trisodium citrate -1.5 -1.5 compare