Fitness data for PP_4102 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: probable uroporphyrin-III c-methyltransferase (EC 2.1.1.107)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
pH Valerolactone (C) pH 6.5 -1.7 -2.0 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml -1.5 -1.8 compare
nitrogen source D-2-Aminobutyric (N) -1.5 -2.0 compare
temperature shift Temperature shift 30_to_21; with MOPS -1.4 -2.2 compare
nitrogen source NAG (N); with MOPS -1.2 -1.0 compare
carbon source D-Glucose (C) -1.2 -1.9 compare
nitrogen source Propiolactam (N) -1.1 -1.9 compare
carbon source acetate (C) -1.1 -1.0 compare
carbon source L-Leucine (C) -1.0 -1.9 compare
stress R2A with Polymyxin B sulfate 0.002 mg/ml -1.0 -1.6 compare
no stress control Growth with no stress -1.0 -1.4 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -1.0 -2.0 compare
temperature Growth at 30C -0.9 -2.2 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.9 +1.4 compare
carbon source 4-Methyl-2-oxopentanoic (C) +1.0 +3.9 compare
pH pH 6 +1.1 +1.5 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +1.1 +2.0 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +1.1 +3.3 compare
carbon source carbon source D-Glucose 55.5 mM +1.2 +3.4 compare
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +1.4 +2.2 compare