Fitness data for PP_4078 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Uncharacterized protein ImpH/VasB
KEGG: type VI secretion system protein ImpH

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
carbon source carbon source 4-vinylphenol 0.01 mM -0.6 -3.4 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -0.4 -2.4 compare
nitrogen source D-2-Aminobutyric (N) -0.4 -2.1 compare
pH pH 6 -0.4 -2.2 compare
carbon source carbon source D-Glucose 55.5 mM -0.4 -2.0 compare
carbon source carbon source 2-Deoxy-D-glucose 100 mM -0.4 -2.1 compare
carbon source carbon source 4-vinylphenol 0.1 mM -0.3 -1.9 compare
pH D-Glucose (C) pH 7 -0.3 -2.3 compare
carbon source carbon source Bisabolene 48.9 mM -0.3 -1.9 compare
stress MOPS minimal media_Glucose20mM with Fluoroacetate 80 mM -0.3 -2.3 compare
carbon source carbon source 2-Deoxy-D-glucose 50 mM -0.3 -1.7 compare
pH Growth at pH6 and (C) Trisodium citrate +0.3 +1.9 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.3 +1.6 compare
supernatant Supernatant; Trichoderma atroviride IMI grown in Vogels_fungal_media, filtered; 0.2X +0.3 +2.3 compare
nitrogen source no extra (N); with MOPS +0.3 +2.0 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus +0.3 +2.1 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.3 +2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +0.4 +2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs +0.4 +2.0 compare
nitrogen source NAG (N); with MOPS +0.5 +2.3 compare