Fitness data for PP_4074 in Pseudomonas putida KT2440

conserved protein of unknown function
SEED: Uncharacterized protein ImpB
KEGG: type VI secretion system protein ImpB

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.9)


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group condition fitness t score  
carbon source ferulate (C); with MOPS -1.7 -2.5 compare
agar plate interaction control Parafilmed volatile agar plate with no fungus -1.3 -3.4 compare
carbon source Nonanoic (C) -1.1 -2.4 compare
carbon source D-Glucose (C) -1.0 -3.4 compare
nitrogen source Ammonium chloride (N); with MOPS -1.0 -1.9 compare
phage P. putida Sci small MOI 0.1 -1.0 -1.3 compare
no stress control Growth with no stress -1.0 -2.1 compare
temperature shift Temperature shift 10_to_25; with MOPS -1.0 -3.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -1.0 -2.7 compare
pH Growth at pH6 and (C) Trisodium citrate -1.0 -2.0 compare
pH Growth at pH9 and (C) Trisodium citrate -1.0 -1.9 compare
pH Valerolactone (C) pH 6.5 -1.0 -1.9 compare
pH Growth at pH6 and (C) D-Glucose -1.0 -2.0 compare
phage P. putida PUT 7 MOI 1 -0.9 -3.0 compare
temperature Growth at 10C; with MOPS -0.9 -4.0 compare
r2a control with 0.2x vogels R2A control with 0.2X Vogels -0.9 -2.2 compare
temperature Growth at 10C; with MOPS -0.9 -2.5 compare
stress R2A with Fusaric 240 ug/mL -0.9 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.9 +1.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +1.0 +3.9 compare