Fitness data for PP_4073 in Pseudomonas putida KT2440

conserved exported protein of unknown function
SEED: Type VI secretion protein VasI
KEGG: type VI secretion system protein VasI

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 1.3)


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group condition fitness t score  
nitrogen source Ammonium chloride (N) -7.2 -3.0 compare
pH Growth at pH7 and (C) D-Glucose -4.7 -2.2 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -2.4 -1.8 compare
in planta Plant=Zea_mays-bx1; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -2.1 -1.8 compare
carbon source carbon source 4-vinylphenol 0.1 mM -2.0 -2.9 compare
pH Valerolactone (C) pH 6.5 -1.8 -1.1 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.7 -1.7 compare
nitrogen source Ammonium chloride (N) -1.7 -1.3 compare
pH pH 7 -1.6 -2.4 compare
carbon source 3-Methyl-2-Oxobutanoic Acid (C) -1.6 -2.5 compare
stress MOPS minimal media_Glucose20mM with Lithium chloride 200 mM -1.5 -2.7 compare
no stress control Growth with no stress -1.5 -0.8 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -1.5 -1.2 compare
phage P. putida Missley MOI 0.1 -1.4 -1.4 compare
nitrogen source NAG (N) -1.4 -2.3 compare
nitrogen source NAG (N); with MOPS +1.3 +1.5 compare
nitrogen source D-2-Aminobutyric (N) +1.3 +1.1 compare
pH Growth at pH6 and (C) Trisodium citrate +1.4 +2.9 compare
pH Growth at pH7 and (C) Trisodium citrate +1.6 +1.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=72_hrs +1.7 +2.2 compare