Fitness data for PP_4068 in Pseudomonas putida KT2440

Transcriptional regulator, Cro/CI family
SEED: cI

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


Add gene:

Or see all 989 experiments or choose conditions

group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -1.0 -3.9 compare
carbon source carbon source 3-O-methyl-glucose 50 mM -1.0 -3.5 compare
pH pH 5 -0.8 -3.3 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 2.15g/hr dextrose, set to 30% DO. -0.5 -2.4 compare
reactor 40hr timepoint of 1L M9/1% dextrose CONTINUOUS FED BATCH fermentation in 2L Sartorius Biostat, feed rate 1g/hr dextrose, set to 30% DO. -0.5 -2.7 compare
in planta Plant=Zea_mays-B73; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=0.5X_MS_agar; Collection=outgrowth_LB; Time=7_days -0.5 -2.4 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.5 -2.0 compare
carbon source carbon source D-Xylose 66.6 mM and Glycerol 108.6 mM -0.5 -1.7 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -0.4 -1.9 compare
pH pH 6 -0.4 -1.5 compare
phage P. putida South MOI 10 -0.4 -1.6 compare
reactor 48hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. -0.4 -2.1 compare
pH Growth at pH6 and (C) Trisodium citrate -0.4 -1.5 compare
in planta Plant=Zea_mays; PlantTreatment=34_degrees_celsius; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -2.3 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant +0.4 +2.0 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=20h_outgrowth_LB; Time=7_days +0.5 +1.8 compare
pH Valerolactone (C) pH 6.5 +0.5 +2.1 compare
phage PUT8 MOI 0.1 +0.5 +2.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs +0.7 +1.8 compare
carbon source Valerolactone (C) +0.8 +3.6 compare