Fitness data for PP_4058 in Pseudomonas putida KT2440

1,4-alpha-glucan branching enzyme
SEED: 1,4-alpha-glucan (glycogen) branching enzyme, GH-13-type (EC 2.4.1.18)
KEGG: 1,4-alpha-glucan branching enzyme

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 5.2)


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group condition fitness t score  
carbon source M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C; then outgrowth in LB -6.3 -6.1 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB_2hrs_then_extra_outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -6.2 -11.2 compare
micoeukaryotes Tetrahymena sp., Mixed culture-1 -6.1 -6.0 compare
carbon source M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C -6.0 -11.6 compare
micoeukaryotes Tetrahymena sp., Mixed culture-2 -5.9 -4.1 compare
carbon source M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C; then outgrowth in LB -5.9 -8.1 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C -5.9 -11.9 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -5.8 -4.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -5.8 -8.0 compare
carbon source 1,5-Pentanediol (C) -5.6 -12.5 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=288_hrs -5.6 -6.6 compare
carbon source M9 minimal media_noCarbon with D-Glucose 10 mM; 30C -5.6 -11.9 compare
carbon source M9 minimal media_noCarbon with Trisodium citrate 10 mM; 30C -5.5 -12.8 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=sterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=288_hrs -5.4 -8.2 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -5.4 -3.7 compare
carbon source M9 minimal media_noCarbon with D-Glucose 10 mM; 30C; then outgrowth in LB -5.3 -6.4 compare
carbon source M9 minimal media_noCarbon with D-Glucose 10 mM; 30C -5.3 -13.3 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C; then outgrowth in LB -5.2 -3.6 compare
carbon source Soil Extract with D-Glucose 10 mM; 30C -5.2 -14.7 compare
stress R2A with Polymyxin B sulfate 0.001 mg/ml +5.4 +40.6 compare