Fitness data for PP_4041 in Pseudomonas putida KT2440

putative glycoside hydrolase
SEED: Glucoamylase (EC 3.2.1.3)

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.3)


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group condition fitness t score  
in planta Plant=Zea_mays; PlantTreatment=25mM_NaCl; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days -0.4 -3.1 compare
nitrogen source NAG (N); with MOPS -0.4 -1.6 compare
temperature Growth at 25C -0.4 -2.0 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=none; SoilTreatmentTime=72_hrs -0.4 -2.3 compare
carbon source ferulate (C); with MOPS -0.3 -1.6 compare
mixed carbon source mixed (C)s Trisodium citrate 10 mM and L-Meta-tyrosine 10 mM -0.3 -2.1 compare
pH Growth at pH6 and (C) D-Glucose -0.3 -1.6 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=144_hrs -0.3 -1.8 compare
stress R2A with Fusaric 240 ug/mL -0.3 -1.7 compare
in planta Plant=Zea_mays; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16h_outgrowth_LB; Time=7_days -0.3 -2.1 compare
phage P. putida PUT 7 MOI 1 -0.3 -1.6 compare
carbon source carbon source Glycerol 108.6 mM +0.3 +2.0 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.3 +2.1 compare
pH pH 7 +0.3 +2.1 compare
pH pH 5 +0.4 +2.2 compare
nitrogen source nitrogen source Ammonium chloride 20mM +0.4 +2.4 compare
pH pH 6 +0.4 +2.3 compare
in planta Plant=Zea_mays; PlantTreatment=NaCl_and_Fusarium; Sample=rhizosphere; GrowthSubstrate=sand_vermiculite_perlite_mix; Collection=16_outgrowth_LB; Time=7_days +0.4 +2.1 compare
pH pH 9 +0.4 +2.5 compare
carbon source carbon source 4-vinylphenol 0.01 mM +0.6 +3.6 compare