Fitness data for PP_4033 in Pseudomonas putida KT2440

Ribonuclease Z
SEED: Ribonuclease Z (EC 3.1.26.11)
KEGG: ribonuclease Z

Top 20 experiments with the strongest phenotypes (|fitness| ≥ 0.4)


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group condition fitness t score  
nitrogen source D-2-Aminobutyric (N) -0.8 -2.2 compare
nitrogen source D-2-Aminobutyric (N) -0.7 -2.7 compare
phage P. putida Sci Big MOI 0.1 -0.7 -2.1 compare
stress R2A with Fusaric 240 ug/mL -0.6 -1.7 compare
carbon source Trisodium citrate (C) -0.6 -2.3 compare
carbon source L-Leucine (C) -0.6 -2.4 compare
soil Soil=PNNL_Prosser_PlotA_B_20191220; Sterility=nonsterile; Collection=outgrowth_in_LB; SoilTreatment=coldshock; SoilTreatmentTime=0_hrs -0.5 -1.8 compare
stress Growth with Chloride 500 mM -0.5 -2.2 compare
pH Growth at pH6 and (C) D-Glucose -0.5 -1.4 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI tmk3mutant -0.5 -1.2 compare
phage P. putida South MOI 10 -0.4 -1.6 compare
temperature Growth at 25C; with MOPS -0.4 -1.5 compare
stress Growth with Chloride 200 mM -0.4 -1.5 compare
carbon source Glucose (C) (40mM) +0.4 +2.6 compare
reactor 24hr timepoint from 1L M9/1% dextrose BATCH fermentation in 2L Sartorius Biostat reactor kept at 10% DO. +0.4 +2.2 compare
carbon source carbon source 4-vinylphenol 0.1 mM +0.4 +1.8 compare
agar plate interaction Parafilmed volatile agar plate with Trichoderma atroviridae IMI ago3mutant +0.5 +2.3 compare
temperature shift Temperature shift 10_to_30; with MOPS +0.5 +2.2 compare
phage P. putida Sci small MOI 0.1 +0.6 +1.9 compare
carbon source ferulate (C); with MOPS +0.6 +1.8 compare